# Rice seed germination

> All ddH<sub>2</sub>O used for this process should be sterilized.

## 1. Homogenization
1. Dehusked the seeds. Select only seeds that are well-developed, fully-filled, clean, and transparent. 
2. Dry-incubate the seeds in dark under 45&deg;C for 24 hours.

## 2. Sterilization
1. Soak the seeds in 3% bleach solution ( add one drop of detergent ) and gently inverting / shaking for 15 minutes.
2. Wash at least 6 times with ddH<sub>2</sub>O, until the water is clear.

## 3. Priming and imbibition
1. Remove the water thoroughly with pipette.
2. (optional) Seed priming. Soak the seeds in 3% KNO<sub>3</sub> solution under room temperature for 24 hours;</i>
3. Soak the seeds in 1 ~ 2% Plant Preservative Mixture&trade; ( PPM&trade; ) solution for 16 ~ 24 hours.
- Add 300 <i>&micro;</i>L PPM into 30 mL sterilized ddH<sub>2</sub>O.
- The PPM&trade; stock solution ( 100% ) is stored at 4&deg;C (a).

## 4. Sowing
1. Remove the PPM solution.
2. Sow the seeds on suitable medium.  
> Optional: Add 0.05 ~ 0.2% ( v / v ) PPM&trade; to the medium, if it is difficult to control contamination. The PPM&trade; can be autoclaved together with the media.

<div style='page-break-after: always;'></div>

# Half-MS medium preparation

| Chemicals                   | Stock<br>Concentration  | Addition         | Final<br>concentration | Location      |
| :--------                   | :---:                   | :---:            | :---:                  | :---:         |
| MS basal salt               | &mdash;                 | 8.66 g           | 2.165 g / L            | &#8545;       |
| Sucrose                     | &mdash;                 | 10 g             | 2.5 g / L              | &#8544;       |
| MES hydrate                 | &mdash;                 | 2 g              | 0.05% (w/v)            | &#8546;       |
| PPM&trade; (optional)       | 100%                    | 2 mL             | 0.05%                  | 4&deg;C ( a ) |
| KOH <sup>&#8251;</sup>      | 5 M                     | ~ 710 &micro;L   | &mdash;                | &#8550;       |
| ddH<sub>2</sub>O            | &mdash;                 | ~ 4 L            | &mdash;                | &mdash;       |
| **Total volume**            |                         | **4 L**          |                        |               |

(optional) The gelling agent: <a href='https://www.sigmaaldrich.com/TW/en/product/sigma/g1910'>Gelzan (G1910)</a> or <a href='https://www.sigmaaldrich.com/TW/en/product/sigma/p8169'>Phytagel ( P8169 )</a> &xrarr; 1.5 g / L ( 0.15% ). Located at &#8544; or &#8552;. Generally, we make 400 mL per bottle, so weigh 0.6 g / 400 mL for each bottle.

The final pH should be around 5.7 ~ 5.8. Autoclave under 121&deg;C for 20 mins.

<sup>&#8251;</sup> KOH is used for pH adjustment. 
To prepare 5 M KOH solution, dilute 330 g of 85% KOH in 1 L ddH<sub>2</sub>O. Since KOH releases heat during dissolution, it is important to add the KOH granules into the water gradually and slowly.
